Helmholtz Imaging CONNECT

Go back Home Solutions MorphoCluster

MorphoCluster

Authors: Simon-Martin Schröder, Rainer Kiko

Keywords: Plankton, Imaging, Pelagic Imaging, Clustering, Annotation

https://github.com/morphocluster/morphocluster/

Efficient Annotation of Plankton images by Clustering

Publications

MorphoCluster: Efficient Annotation of Plankton Images by Clustering

Schröder S, Kiko R, Koch R - Sensors - 2020

10.3390/s20113060

Logo

License

GPL

MorphoCluster in Helmholtz Imaging CONNECT:

Expert

Timo Christian

Deutsches Elektronen-Synchrotron - Hamburg

Project Manager for the Helmholtz Transfer Academy "Future Innovators". Interested in anything that can solve problems. Trying to unlock the potential of scientific development to also solve short-term problems of the real-world.

In Helmholtz Imaging CONNECT
➤Modalities: 237 ➤Applications: 152 ➤Instruments: 0 ➤Labs: 0 ➤Facilities: 36 ➤Centers: 1 ➤Solutions: 49

Expert

Astrid Cornils

Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung - Bremerhaven

interesting im digitizing marine plankton samples, ZooScan, LOKI, UVP, stereo microscopy
looking for machine learning solutions to annotate plankton organisms and morphological structure to study eco-physiological traits

In Helmholtz Imaging CONNECT
➤Modalities: 0 ➤Applications: 1 ➤Instruments: 0 ➤Labs: 0 ➤Facilities: 0 ➤Centers: 1 ➤Solutions: 1

Expert

Simon-Martin Schröder

Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung - Kiel

Computer Scienctist at Kiel University.

In Helmholtz Imaging CONNECT
➤Modalities: 0 ➤Applications: 0 ➤Instruments: 0 ➤Labs: 1 ➤Facilities: 0 ➤Centers: 1 ➤Solutions: 1

Application

Pelagic Imaging

Pelagic imaging describes studying the ecosystem of the pelagic zone by means of images. Examples here include the studying of e.g. the growth and abundance of various species of plankton in the ocean to get …

In Helmholtz Imaging CONNECT
➤Facilities: 0 ➤Centers: 6 ➤Instruments: 1 ➤Labs: 1 ➤Modalities: 0 ➤Experts: 12 ➤Solutions: 1

No facility found.

Center

GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel (GEOMAR)

GEOMAR Helmholtz Centre for Ocean Research Kiel is a world-wide leading institute of marine research. We investigate chemical, physical, biological and geological processes of the seafloor, oceans and ocean margins and their interactions with the …

In Helmholtz Imaging CONNECT
➤Applications: 24 ➤Facilities: 1 ➤Instruments: 5 ➤Labs: 5 ➤Modalities: 10 ➤Experts: 9 ➤Solutions: 1

No instrument found.

No modality found.

Lab

Pelagic Imaging Consortium (PIC)

The Pelagic Imaging Consortium gathers scientists from a number of Helmholtz centers (in particular from AWI, HEREON, GEOMAR, UFZ and KIT) interested in the imaging of all kinds of particles in the pelagic zone of …

In Helmholtz Imaging CONNECT
➤Applications: 2 ➤Facilities: 0 ➤Centers: 7 ➤Instruments: 5 ➤Modalities: 0 ➤Experts: 19 ➤Solutions: 1