DR. Philipp Heuser
Helmholtz Imaging Support Unit Hamburg
Research and Innovation in Computing - RIC
DESY IT
D-22607 Hamburg
Head of the Helmholtz Imaging Support Unit at DESY Hamburg. Background in computational structural biology, pattern recognition, artificial intelligence, convolutional neural networks and cloud computing.
Publications
PickYOLO: Fast deep learning particle detector for annotation of cryo electron tomograms
Genthe E, Miletic S, Tekkali I, Hennell James R, Marlovits T, Heuser P - Journal of Structural Biology - 2023
The CCP4 suite: integrative software for macromolecular crystallography
Agirre J, Atanasova M, Bagdonas H, Ballard C, Baslé A, Beilsten-Edmands J, Borges R, Brown D, Burgos-Mármol J, Berrisford J, Bond P, Caballero I, Catapano L, Chojnowski G, Cook A, Cowtan K, Croll T, Debreczeni J, Devenish N, Dodson E, Drevon T, Emsley P, Evans G, Evans P, Fando M, Foadi J, Fuentes-Montero L, Garman E, Gerstel M, Gildea R, Hatti K, Hekkelman M, Heuser P, Hoh S, Hough M, Jenkins H, Jiménez E, Joosten R, Keegan R, Keep N, Krissinel E, Kolenko P, Kovalevskiy O, Lamzin V, Lawson D, Lebedev A, Leslie A, Lohkamp B, Long F, Malý M, McCoy A, McNicholas S, Medina A, Millán C, Murray J, Murshudov G, Nicholls R, Noble M, Oeffner R, Pannu N, Parkhurst J, Pearce N, Pereira J, Perrakis A, Powell H, Read R, Rigden D, Rochira W, Sammito M, Sánchez Rodríguez F, Sheldrick G, Shelley K, Simkovic F, Simpkin A, Skubak P, Sobolev E, Steiner R, Stevenson K, Tews I, Thomas J, Thorn A, Valls J, Uski V, Usón I, Vagin A, Velankar S, Vollmar M, Walden H, Waterman D, Wilson K, Winn M, Winter G, Wojdyr M, Yamashita K - Acta Crystallographica Section D Structural Biology - 2023
High-resolution ex vivo analysis of the degradation and osseointegration of Mg-xGd implant screws in 3D
Krüger D, Galli S, Zeller-Plumhoff B, Wieland D, Peruzzi N, Wiese B, Heuser P, Moosmann J, Wennerberg A, Willumeit-Römer R - Bioactive Materials - 2022
An active learning approach for the interactive and guided segmentation of tomography data
Kazimi B, Heuser P, Schluenzen F, Cwieka H, Krüger D, Zeller-Plumhoff B, Wieland F, Hammel J, Beckmann F, Moosmann J - Developments in X-Ray Tomography XIV - 2022
The accuracy of protein models automatically built into cryo-EM maps with ARP / wARP
Chojnowski G, Sobolev E, Heuser P, Lamzin V - International Union of Crystallography (IUCr) - 2021
The XBI BioLab for life science experiments at the European XFEL
Han H, Round E, Schubert R, Gül Y, Makroczyová J, Meza D, Heuser P, Aepfelbacher M, Barák I, Betzel C, Fromme P, Kursula I, Nissen P, Tereschenko E, Schulz J, Uetrecht C, Ulicný J, Wilmanns M, Hajdu J, Lamzin V, Lorenzen K - International Union of Crystallography (IUCr) - 2021
Scaling the U-net: segmentation of biodegradable bone implants in high-resolution synchrotron radiation microtomograms
Baltruschat I, Ćwieka H, Krüger D, Zeller-Plumhoff B, Schlünzen F, Willumeit-Römer R, Moosmann J, Heuser P - Scientific Reports - 2021
Macromolecular model building over the web
Sobolev E, Heuser P, Lamzin V - Acta Crystallographica Section A Foundations and Advances - 2021
The use of local structural similarity of distant homologues for crystallographic model building from a molecular-replacement solution
Chojnowski G, Choudhury K, Heuser P, Sobolev E, Pereira J, Oezugurel U, Lamzin V - International Union of Crystallography (IUCr) - 2020
New ARP/wARP web service integrated into virtual computation frameworks
Sobolev E, Heuser P, Chojnowski G, Oezugurel U, Kantamneni S, Lamzin V - Acta Crystallographica Section A Foundations and Advances - 2019
West-Life: A Virtual Research Environment for structural biology
Morris C, Andreetto P, Banci L, Bonvin A, Chojnowski G, Cano L, Carazo J, Conesa P, Daenke S, Damaskos G, Giachetti A, Haley N, Hekkelman M, Heuser P, Joosten R, Kouřil D, Křenek A, Kulhánek T, Lamzin V, Nadzirin N, Perrakis A, Rosato A, Sanderson F, Segura J, Schaarschmidt J, Sobolev E, Traldi S, Trellet M, Velankar S, Verlato M, Winn M - Elsevier BV - 2019
A load frame for in situ tomography at PETRA III
Moosmann J, Wieland D, Zeller-Plumhoff B, Galli S, Krüger D, Ershov A, Lautner S, Sartori J, Dean M, Köhring S, Burmester H, Dose T, Peruzzi N, Wennerberg A, Willumeit-Römer R, Wilde F, Heuser P, Hammel J, Beckmann F - SPIE-Intl Soc Optical Eng - 2019
